![]() ![]() ![]() The entry might look like like '/condabin' or similar. If they are set to make some other software package work, but they interfere with the programs above, you will have to unset them, and set them only when you need the other software.Ĭheck PATH in your shell and make sure you have an entry that points to your installation, before any other python entries. While used in previous versions of EMAN, variables are no longer used, and in some cases may interfere with Anaconda. The first thing to check is whether you have PYTHONPATH, PYTHONHOME, LD_LIBRARY_PATH or DYLD_LIBRARY_PATH set in your shell.If you have problems with any of these programs.Addġ e2version.py 2 e2speedtest.py 3 e2display.py 4 e2proc2d.py :64:64:1 test.hdf -process mask.sharp:outer_radius=24 5 e2display.py test.hdf If you have a ~/.bash_profile startup file, ~/.profile will not be read. Mac users (bash only): On MacOS, this modifies ~/.profile. profile instructions are talking about, this may help: Mac users: If you don't understand what the. Users who want to use another python version, like the system version, can run 'conda deactivate' which will remove EMAN2 and its python version from PATH. profile/.bashrc will ensure updating PATH, so that python/conda/anaconda in the installed EMAN2 package are found correctly. Don't forget to restart your shell if you changed the.The copy of OpenMPI/Pydusa now distributed with the binaries should work on Macs/Linux workstations in most cases. You should not normally need to reinstall OpenMPI.If you use a different shell, such as tcsh or zsh, you may need to edit the appropriate file yourself.If you have any other similar looking blocks before the last one, it might be a good idea to remove them to avoid any potential conflicts. 7 unset _conda_setup 8 # <<< conda init <<< 9 1 # added by EMAN2 2.31 installer 2 # > conda init > 3 # !! Contents within this block are managed by 'conda init' !! 4. ![]()
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